[1] SHI P J,MENG K,ZHOU Z G,et al. The host species affects the microbial community in the goat rumen[J]. Letters in Applied Microbiology,2008,46(1):132-135.
[2] HACKSTEIN J H P,VANALEN T A. Fecal methanogens and vertebrate evolution[J].Evolution,1996,50(2):559-572.
[3] FRIEDMAN N,JAMI E,MIZRAHI I. Compositional and functional dynamics of the bovine rumen methanogenic community across different developmental stages[J].Environmental Microbiology,2017,19(8):3365-3373.
[4] 冯仰廉.反刍动物营养学[M].北京:科学出版社,2004.FENG Y L. Ruminant Nutrition[M].Beijing:Science Press,2004. (in Chinese)
[5] JOHNSON K A,JOHNSON D E. Methane emissions from cattle[J]. Journal of Animal Science,1995,73(8):2483-2492.
[6] JARVIS G N,STROMPL C,BURGESS D M,et al. Isolation and identification of ruminal methanogens from grazing cattle[J]. Current Microbiology,2000,40(5):327-332.
[7] MILLER T L,WOLIN M J,KUSEL E A. Isolation and characterization of methanogens from animal feces[J]. Systematic and Applied Microbiology,1986,8(3):234-238.
[8] WRIGHT A D G,WILLIAMS A J,WINDER B,et al. Molecular diversity of rumen methanogens from sheep in Western Australia[J].Applied and Environmental Microbiology,2004,70(3):1263-1270.
[9] DENMAN S E,TOMKINS N W,MCSWEENEY C S.Quantitation and diversity analysis of ruminal methanogenic populations in response to the antime-thanogenic compound bromochloromethane[J]. FEMS Microbiology Ecology,2007,62(3):313-322.
[10] SNELLING T J,GENC B,MCKAIN N,et al. Diversity and community composition of methanogenic archaea in the rumen of Scottish upland sheep assessed by different methods[J].PLoS One,2014,9(9):e106491.
[11] SINGH K M,PATEL A K,SHAH R K,et al. Potential functional gene diversity involved in methanogenesis and methanogenic community structure in Indian buffalo (Bubalus bubalis) rumen[J].Journal of Applied Genetics,2015,56(3):411-426.
[12] MAO S Y,YANG C F, ZHU W Y.Phylogenetic analysis of methanogens in the pig feces[J]. Current Microbiology, 2011,62(5):1386-1389.
[13] LUO Y H,SU Y,WRIGHT A D G,et al. Lean breed Landrace pigs harbor fecal methanogens at higher diversity and density than obese breed Erhualian pigs[J].Archaea,2012,Epub ahead of print.
[14] 章纯熙.中国水牛科学[M].南宁:广西科学技术版社,2000.ZHANG C X.China Science and Buffalo[M].Nanning:Guangxi Science and Technology Press,2010.(in Chinese)
[15] 张丽英.饲料分析及饲料质量检测技术[M].第3版.北京:中国农业大学出版社,2007.ZHANG L Y. Feed Analysis and Feed Quality Testing Technology[M].3rd edition.Beijing:China Agricultural University Press,2007. (in Chinese)
[16] WRIGHT E S,YILMAZ L S,NOGUERA D R. DECIPHER,a search-based approach to chimera identification for 16S rRNA sequences[J].Applied and Environmental Microbiology,2012,78(3):717-725.
[17] COLE J R,WANG Q,CARDENAS E,et al. The ribosomal database project:Improved alignments and new tools for rRNA analysis[J].Nucleic Acids Research,2008,37(s1):D141-D145.
[18] SCHLOSS P D,WESTCITT S L,RYABIN T,et al. Introducing mothur:Open-source,platform-independent, community-supported software for describing and comparing microbial communities[J].Applied and Environmental Microbiology,2009,75(23):7537-7541.
[19] MOYER C L,TIEDJE J M, DOBBS F C,et al. A computer-simulated restriction fragment length polymorphism analysis of bacterial small-subunit rRNA genes:Efficacy of selected tetrameric restriction enzymes for studies of microbial diversity in nature[J]. Applied and Environmental Microbiology,1996,62(7):2501-2507.
[20] ST-PIERRE B,WRIGHT A. Diversity of gut methanogens in herbivorous animals[J]. Animal,2013,7(S1):49-56.
[21] 刘开朗,王加启,卜登攀. 2008-2009年反刍动物营养研究进展Ⅰ.瘤胃微生物多样性与功能[J]. 中国畜牧兽医,2010,37(2):5-14.LIU K M,WANG J Q,BU D P. Annual review of ruminant nutrition in 2008-2009Ⅰ.Diversity and functionality of rumen microflora[J].China Animal Husbandry & Veterinary Medicine,2010,37(2):5-14.(in Chinese)
[22] SAMAL L,CHAUDHARY L C,AGARWAL N,et al. Effects of plants containing secondary metabolites as feed additives on rumen metabolites and methanogen diversity of buffaloes[J].Animal Production Science, 2016,56(3):472-481.
[23] WRIGHT A D G,MA X,OBISPO N E. Methanobrevibacter phylotypes are the dominant methanogens in sheep from Venezuela[J].Microbial Ecology,2008,56(2):390-394.
[24] WRIGHT A D,TOOVEY A F, PIMM C L,Molecular identification of methanogenic archaea from sheep in Queensland, Australia reveal more uncultured novel archaea[J].Anaerobe,2006,12(3):134-139.
[25] KING E E,SMITH R P,ST-PIERRE B,et al. Differences in the rumen methanogen populations of lactating Jersey and Holstein dairy cows under the same diet regimen[J].Applied and Environmental Microbiology, 2011,77(16):5682-5687.
[26] TAN H Y,SIEO C C,LEE C M, et al. Diversity of bovine rumen methanogens in vitro in the presence of condensed tannins,as determined by sequence analysis of 16S rRNA gene library[J].The Journal of Microbiology,2011,49(3):492-498.
[27] TATSUOKA N,MOHAMMED N,MITSUMORI M,et al. Phylogenetic analysis of methyl coenzyme M reductase detected from the bovine rumen[J]. Letters in Applied Microbiology,2004,39(3):257-260.
[28] CHAUDHARY P P,SIROHI S K. Dominance of Methanomicrobium phylotype in methanogen population present in Murrah buffaloes (Bubalus bubalis)[J]. Letters in Applied Microbiology,2009,49(2):274-277.
[29] CARBERRY C A,WATERS S M,Kenny D A,et al. Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type[J]. Applied and Environmental Microbiology,2014, 80(2):586-594.
[30] HOOK S E,WRIGHT A D,MCBRIDE B W, Methanogens:Methane producers of the rumen and mitigation strategies[J]. Archaea,2010,2010:945785.
[31] WHITFORD M F,TEATHER R M,FORSTER R J.Phylogenetic analysis of methanogens from the bovine rumen[J]. BMC Microbiology,2001,1(1):5.
[32] SHIN E C,CHOI B R,LIM W J,et al.Phylogenetic analysis of archaea in three fractions of cow rumen based on the 16S rDNA sequence[J].Anaerobe,2004,10(6):313-319.
[33] TAJIMA K,NAGAMINE T,MATSUI H,et al. Phylogenetic analysis of archaeal 16S rRNA libraries from the rumen suggests the existence of a novel group of archaea not associated with known methanogens[J].FEMS Microbiology Letters,2001,200(1):67-72.
[34] EVANS P N,HINDS L A,SLY L I,et al. Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii)[J]. Applied and Environmental Microbiology, 2009, 75(8):2598-2602.
[35] SAMUEL B S, HANSEN E E, MANCHESTER J K, et al. Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut[J].Proceedings of the National Academy of Sciences,2007,104(25):10643-10648.
[36] ZHOU M I,HERNANDEZ-SANABRIA E.Assessment of the microbial ecology of ruminal methanogens in cattle with different feed efficiencies[J]. Applied and Environmental Microbiology, 2009,75(20):6524-6533.
[37] ZHOU M,HERNANDEZ-SANABRIA E. Characterization of variation in rumen methanogenic communities under different dietary and host feed efficiency conditions,as determined by PCR-denaturing gradient gel electrophoresis analysis[J].Applied and Environmental Microbiology,2010,76(12):3776-3786.
[38] ST-PIERRE B,WRIGHT A D. Molecular analysis of methanogenic archaea in the forestomach of the alpaca (Vicugna pacos)[J].BMC Microbiology,2012,12(1):1. |