›› 2010, Vol. 37 ›› Issue (3): 131-136.

• 遗传繁育 • Previous Articles     Next Articles

Cloning and Sequence Analysis of Dezhou Donkey Heart Fatty Acid-binding Protein(H-FABP) Gene

LI Lei1, SUN Yu-jiang1,2, LIU Lin3, MIN Ling-jiang1, CHI Liang1, PAN Qing-jie1   

  1. (1.Institute of Reproduction Development and Genetic Engineering,College of Animal Science and Technology,Qingdao Agricultural University,Qingdao 266109,China; 2.Institute of Agricultural Science of Dongying of Shandong Province,Dongying 257091,China; 3.Yantai Animal Disease Prevention and Control Center,Yantai 264003,China)
  • Received:1900-01-01 Revised:1900-01-01 Online:2010-03-20 Published:2010-03-20
  • Contact: PAN Qing-jie

Abstract: The Dezhou donkey heart fatty acid-binding protein (H-FABP) gene was cloned and compared the nucleotide sequence of coding region and amino-acid sequences with the homologous H-FABP genes in other eleven species retrieved from GenBank . The results showed that the Dezhou donkey H-FABP gene had four exons and three introns. The size of exon 1,exon 2,exon 3 and exon 4 were 73,173,102 and 57 bp respectively; while the size of intron 1,intron 2 and intron 3 were 3500,1981 and 1425 bp respectively. The size of CDS sequence of the Dezhou donkey H-FABP gene was 405 bp,which encoding 134 amino acids. The nucleotide sequences among different species were quite conservative. The homologies of the coding region of H-FABP genes between the Dezhou donkey and horse,Sus scrofa,human,cattle,goat,yak,rat,mouse,Gallus gallus,Anas platyrhynchos and zebra-fish were 96.79%,91.36%,89.14%,88.89%,88.89%,88.64%,84.07%,83.46%,75.80%,74.81% and 67.90% respectively. The phylogenetic trees were constructed by ME,NJ and UPGMA methods using the coding region DNA sequences of the H-FABP genes in all species. The results indicated that the molecular phylogenetic trees were basically coincident. This result of phylogenetic clustering was identical to the zoological classification system,indicating that the H-FABP gene was also fit to construct molecular phylogenetic tree among different species.

Key words: Dezhou donkey; heart fatty acid-binding protein gene; cloning; sequence analysis; molecular phylogenetic evaluation

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