China Animal Husbandry and Veterinary Medicine ›› 2022, Vol. 49 ›› Issue (12): 4665-4673.doi: 10.16431/j.cnki.1671-7236.2022.12.016
• Genetics and Breeding • Previous Articles Next Articles
LI Xiaojiao, HE Yanhua, ZHU Xinyu, ZOU Xian, LUO Chenglong
Received:
2022-03-21
Online:
2022-12-05
Published:
2022-12-01
CLC Number:
LI Xiaojiao, HE Yanhua, ZHU Xinyu, ZOU Xian, LUO Chenglong. Research Progress on Application of CRISPR/Cas9 Technology in Pigs and Chickens[J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(12): 4665-4673.
[1] SCHMUTZ J, GRIMWOOD J.Genomes:Fowl sequence[J].Nature, 2004, 432(7018):679-680. [2] BRADLEY A.Mining the mouse genome[J].Nature, 2002, 420(6915):512-514. [3] VAN EENENNAAM A L, DE FIGUEIREDO SILVA F, TROTT J F, et al.Genetic engineering of livestock:The opportunity cost of regulatory delay[J].Annual Review of Animal Biosciences, 2021, 9:453-478. [4] PERISSE I V, FAN Z, SINGINA G N, et al.Improvements in gene editing technology boost its applications in livestock[J].Frontiers in Genetics, 2020, 11:614688. [5] RAN F A, HSU P D, WRIGHT J, et al.Genome engineering using the CRISPR-Cas9 system[J].Nature Protocols, 2013, 8(11):2281-2308. [6] BI Y, HUA Z, LIU X, et al.Isozygous and selectable marker-free MSTN knockout cloned pigs generated by the combined use of CRISPR/Cas9 and Cre/LoxP[J].Scientific Reports, 2016, 6:31729. [7] LIU X, LIU H, WANG M, et al.Disruption of the ZBED6 binding site in intron 3 of IGF2 by CRISPR/Cas9 leads to enhanced muscle development in Liang Guang Small Spotted pigs[J].Transgenic Research, 2019, 28(1):141-150. [8] QIAN L, TANG M, YANG J, et al.Targeted mutations in myostatin by zinc-finger nucleases result in double-muscled phenotype in Meishan pigs[J]. Scientific Reports, 2015, 5:14435. [9] WANG K, OUYANG H, XIE Z, et al.Efficient generation of myostatin mutations in pigs using the CRISPR/Cas9 system[J].Scientific Reports, 2015, 5:16623. [10] RAO S, FUJIMURA T, MATSUNARI H, et al.Efficient modification of the myostatin gene in porcine somatic cells and generation of knockout piglets[J].Molecular Reproduction and Development, 2016, 83(1):61-70. [11] VAN DE LAVOIR M C, DIAMOND J H, LEIGHTON P A, et al.Germline transmission of genetically modified primordial germ cells[J].Nature, 2006, 441(7094):766-769. [12] MACDONALD J, GLOVER J D, TAYLOR L, et al.Characterisation and germline transmission of cultured avian primordial germ cells[J].PLoS One, 2010, 5(11):e15518. [13] GAO M, ZHU X, YANG G, et al.CRISPR/Cas9-mediated gene editing in porcine models for medical research[J].DNA and Cell Biology, 2021, 40(12):1462-1475. [14] WHITWORTH K M, LEE K, BENNE J A, et al.Use of the CRISPR/Cas9 system to produce genetically engineered pigs from in vitro-derived oocytes and embryos[J].Biology of Reproduction, 2014, 91(3):78. [15] WHITWORTH K M, ROWLAND R R, EWEN C L, et al.Gene-edited pigs are protected from Porcine reproductive and respiratory syndrome virus[J].Nature Biotechnology, 2016, 34(1):20-22. [16] KOSLOVA A, TREFIL P, MUCKSOVA J, et al.Precise CRISPR/Cas9 editing of the NHE1 gene renders chickens resistant to the J subgroup of Avian leukosis virus[J].Proceedings of the National Academy of Sciences of the United States of America, 2020, 117(4):2108-2112. [17] 肖榕.利用猪全基因组CRISPR/Cas9敲除文库筛选猪流感病毒复制必需宿主基因[D].武汉:华中农业大学, 2019. XIAO R.Screening of essential host genes required to support Swine influenza virus replication utilizing pig genome-scale CRISPR/Cas9 knockout libraries[D].Wuhan:Huazhong Agricultural University, 2019.(in Chinese) [18] ZHAO C, LIU H, XIAO T, et al.CRISPR screening of porcine sgRNA library identifies host factors associated with Japanese encephalitis virus replication[J].Nature Communication, 2020, 11(1):5178. [19] DESCHAMPS J Y, ROUX F A, SAÏ P, et al.History of xenotransplantation[J].Xenotransplantation, 2005, 12(2):91-109. [20] MAGRE S, TAKEUCHI Y, BARTOSCH B.Xenotransplantation and pig Endogenous retroviruses[J]. Reviews in Medical Virology, 2003, 13(5):311-329. [21] PHELPS C J, KOIKE C, VAUGHT T D, et al.Production of alpha 1, 3-galactosyltransferase-deficient pigs[J].Science, 2003, 299(5605):411-414. [22] DENNER J, SCHUURMAN H J, PATIENCE C.The international xenotransplantation association consensus statement on conditions for undertaking clinical trials of porcine islet products in type 1 diabetes——chapter 5:Strategies to prevent transmission of Porcine endogenous retroviruses[J].Xenotransplantation, 2009, 16(4):239-248. [23] SEMAAN M, ROTEM A, BARKAI U, et al.Screening pigs for xenotransplantation:Prevalence and expression of Porcine endogenous retroviruses in Göttingen minipigs[J].Xenotransplantation, 2013, 20(3):148-156. [24] YANG L, GVELL M, NIU D, et al.Genome-wide inactivation of Porcine endogenous retroviruses (PERVs)[J].Science, 2015, 350(6264):1101-1104. [25] NIU D, WEI H J, LIN L, et al.Inactivation of porcine endogenous retrovirus in pigs using CRISPR-Cas9[J].Science, 2017, 357(6357):1303-1307. [26] YUE Y, XU W, KAN Y, et al.Extensive germline genome engineering in pigs[J].Nature Biomedical Engineering, 2021, 5(2):134-143. [27] BATES G P, DORSEY R, GUSELLA J F, et al.Huntington disease[J]. Nature Reviews Disease Primers, 2015, 1:15005. [28] YAN S, TU Z, LIU Z, et al.A huntingtin knockin pig model recapitulates features of selective neurodegeneration in Huntington's disease[J].Cell, 2018, 173(4):989-1002. [29] SATO M, KOSUKE M, KORIYAMA M, et al.Timing of CRISPR/Cas9-related mRNA microinjection after activation as an important factor affecting genome editing efficiency in porcine oocytes[J].Theriogenology, 2018, 108:29-38. [30] HAN K, LIANG L, LI L, et al.Generation of Hoxc13 knockout pigs recapitulates human ectodermal dysplasia-9[J]. Human Molecular Genetics, 2017, 26(1):184-191. [31] KANG J T, RYU J, CHO B, et al.Generation of RUNX3 knockout pigs using CRISPR/Cas9-mediated gene targeting[J]. Reproduction in Domestic Animals, 2016, 51(6):970-978. [32] VAN GORP H, DELPUTTE P L, NAUWYNCK H J.Scavenger receptor CD163, a Jack-of-all-trades and potential target for cell-directed therapy[J].Molecular Immunology, 2010, 47(7-8):1650-1660. [33] CALVERT J G, SLADE D E, SHIELDS S L, et al.CD163 expression confers susceptibility to Porcine reproductive and respiratory syndrome viruses[J].Journal of Virology, 2007, 81(14):7371-7379. [34] BURKARD C, LILLICO S G, REID E, et al.Precision engineering for PRRSV resistance in pigs:Macrophages from genome edited pigs lacking CD163 SRCR5 domain are fully resistant to both PRRSV genotypes while maintaining biological function[J].PLoS Pathogens, 2017, 13(2):e1006206. [35] YANG Y L, LIU J, WANG T Y, et al.Aminopeptidase N is an entry co-factor triggering Porcine deltacoronavirus entry via an endocytotic pathway[J]. Journal of Virology, 2021, 95(21):e0094421. [36] GUO C, WANG M, ZHU Z, et al.Highly efficient generation of pigs harboring a partial deletion of the CD163 SRCR5 domain, which are fully resistant to Porcine reproductive and respiratory syndrome virus 2 infection[J].Frontiers in Immunology, 2019, 10:1846. [37] WHITWORTH K M, PRATHER R S.Gene editing as applied to prevention of reproductive porcine reproductive and respiratory syndrome[J].Molecular Reproduction and Development, 2017, 84(9):926-933. [38] ZHANG Q, YOO D.PRRS virus receptors and their role for pathogenesis[J].Veterinary Microbiology, 2015, 177(3-4):229-241. [39] TU C F, CHUANG C K, HSIAO K H, et al.Lessening of Porcine epidemic diarrhoea virus susceptibility in piglets after editing of the CMP-N-glycolylneuraminic acid hydroxylase gene with CRISPR/Cas9 to nullify N-glycolylneuraminic acid expression[J]. PLoS One, 2019, 14(5):e0217236. [40] WHITWORTH K M, ROWLAND R R R, PETROVAN V, et al.Resistance to Coronavirus infection in amino peptidase N-deficient pigs[J].Transgenic Research, 2019, 28(1):21-32. [41] YUAN H, YANG L, ZHANG Y, et al.Current status of genetically modified pigs that are resistant to virus infection[J].Viruses, 2022, 14(2):e0276422. [42] SHALEM O, SANJANA N E, HARTENIAN E, et al.Genome-scale CRISPR-Cas9 knockout screening in human cells[J].Science, 2014, 343(6166):84-87. [43] PUSCHNIK A S, MAJZOUB K, OOI Y S, et al.A CRISPR toolbox to study virus-host interactions[J].Nature Reviews Microbiology, 2017, 15(6):351-364. [44] SUN L, ZHAO C, FU Z, et al.Genome-scale CRISPR screen identifies TMEM41B as a multi-function host factor required for Coronavirus replication[J].PLoS Pathogens, 2021, 17(12):e1010113. [45] YU C, ZHONG H, YANG X, et al.Establishment of a pig CRISPR/Cas9 knockout library for functional gene screening in pig cells[J].Biotechnology Journal, 2021, 27(4):e2100408. [46] YANG D, WANG C E, ZHAO B, et al.Expression of Huntington's disease protein results in apoptotic neurons in the brains of cloned transgenic pigs[J].Human Molecular Genetics, 2010, 19(20):3983-3994. [47] LI X, YANG Y, BU L, et al.Rosa26-targeted swine models for stable gene over-expression and Cre-mediated lineage tracing[J]. Cell Research, 2014, 24(4):501-504. [48] RUAN J, LI H, XU K, et al.Highly efficient CRISPR/Cas9-mediated transgene knockin at the H11 locus in pigs[J].Scientific Reports, 2015, 5:14253. [49] XIE Z, JIAO H, XIAO H, et al.Generation of pRSAD2 gene knock-in pig via CRISPR/Cas9 technology[J]. Antiviral Research, 2020, 174:104696. [50] MA L, WANG Y, WANG H, et al.Screen and verification for transgene integration sites in pigs[J].Scientific Reports, 2018, 8(1):7433. [51] SANDER J D, JOUNG J K.CRISPR-Cas systems for editing, regulating and targeting genomes[J].Nature Biotechnology, 2014, 32(4):347-355. [52] CHU V T, WEBER T, WEFERS B, et al.Increasing the efficiency of homology-directed repair for CRISPR-Cas9-induced precise gene editing in mammalian cells[J]. Nature Biotechnology, 2015, 33(5):543-548. [53] MARUYAMA T, DOUGAN S K, TRUTTMANN M C, et al.Increasing the efficiency of precise genome editing with CRISPR-Cas9 by inhibition of nonhomologous end joining[J].Nature Biotechnology, 2015, 33(5):538-542. [54] AUER T O, DUROURE K, DE CIAN A, et al.Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair[J].Genome Research, 2014, 24(1):142-153. [55] CRISTEA S, FREYVERT Y, SANTIAGO Y, et al.In vivo cleavage of transgene donors promotes nuclease-mediated targeted integration[J]. Biotechnology and Bioengineering, 2013, 110(3):871-880. [56] OISHI I, YOSHII K, MIYAHARA D, et al.Targeted mutagenesis in chicken using CRISPR/Cas9 system[J]. Scientific Reports, 2016, 6:23980. [57] PARK T S, LEE H J, KIM K H, et al.Targeted gene knockout in chickens mediated by TALENs[J].Proceedings of the National Academy of Sciences of the United States of America, 2014, 111(35):12716-12721. [58] ZUO Q, WANG Y, CHENG S, et al.Site-directed genome knockout in chicken cell line and embryos can use CRISPR/Cas gene editing technology[J].G3-Genes Genomes Genetics, 2016, 6(6):1787-1792. [59] TAYLOR L, CARLSON D F, NANDI S, et al.Efficient TALEN-mediated gene targeting of chicken primordial germ cells[J]. Development, 2017, 144(5):928-934. [60] WOODCOCK M E, GHEYAS A A, MASON A S, et al.Reviving rare chicken breeds using genetically engineered sterility in surrogate host birds[J].Proceedings of the National Academy of Sciences of the United States of America, 2019, 116(42):20930-20937. [61] OULAD-ABDELGHANI M, BOUILLET P, DÉCIMO D, et al.Characterization of a premeiotic germ cell-specific cytoplasmic protein encoded by Stra8, a novel retinoic acid-responsive gene[J].Journal of Molecular Cell Biology, 1996, 135(2):469-477. [62] MARK M, JACOBS H, OULAD-ABDELGHANI M, et al.STRA8-deficient spermatocytes initiate, but fail to complete, meiosis and undergo premature chromosome condensation[J].Journal of Cell Science, 2008, 121(Pt 19):3233-3242. [63] ZHANG Y, WANG Y, ZUO Q, et al.CRISPR/Cas9 mediated chicken Stra8 gene knockout and inhibition of male germ cell differentiation[J]. PLoS One, 2017, 12(2):e0172207. [64] CHALLAGULLA A, JENKINS K A, O'NEIL T E, et al.Germline engineering of the chicken genome using CRISPR/Cas9 by in vivo transfection of PGCs[J]. Animal Biotechnology, 2020, 24:1-10. [65] XU K, HAN C X, ZHOU H, et al.Effective MSTN gene knockout by AdV-delivered CRISPR/Cas9 in postnatal chick leg muscle[J].International Journal of Molecular Sciences, 2020, 21(7):4-6. [66] CHAI N, BATES P.Na+/H+ exchanger type 1 is a receptor for pathogenic subgroup J Avian leukosis virus[J]. Proceedings of the National Academy of Sciences of the United States of America, 2006, 103(14):5531-5536. [67] KUCEROVÁ D, PLACHY J, REINISOVÁ M, et al.Nonconserved tryptophan 38 of the cell surface receptor for subgroup J Avian leukosis virus discriminates sensitive from resistant avian species[J].Journal of Virology, 2013, 87(15):8399-8407. [68] LEE H J, LEE K Y, PARK Y H, et al.Acquisition of resistance to Avian leukosis virus subgroup B through mutations on TVB cysteine-rich domains in DF-1 chicken fibroblasts[J]. Veterinary Research, 2017, 48(1):48. [69] STRAATHOF K C, PULō M A, YOTNDA P, et al.An inducible caspase 9 safety switch for T-cell therapy[J]. Blood, 2005, 105(11):4247-4254. [70] MARIN V, CRIBIOLI E, PHILIP B, et al.Comparison of different suicide-gene strategies for the safety improvement of genetically manipulated T cells[J].Human Gene Therapy Methods, 2012, 23(6):376-386. [71] BALLANTYNE M, WOODCOCK M, DODDAMANI D, et al.Direct allele introgression into pure chicken breeds using Sire Dam Surrogate (SDS) mating[J].Nature Communication, 2021, 12(1):659. [72] 林晓, 李硕, 金子笛, 等.DMRT1和FOXL2基因在动物性别决定中的功能研究进展[J].中国家禽, 2021, 43(9):98-105. LIN X, LI S JIN Z D.Research progress on the functions of DMRT1 and FOXL2 genes in animal sex determination[J].China Poultry, 2021, 43(9):98-105.(in Chinese) [73] IOANNIDIS J, TAYLOR G, ZHAO D, et al.Primary sex determination in birds depends on DMRT1 dosage, but gonadal sex does not determine adult secondary sex characteristics[J].Proceedings of the National Academy of Sciences of the United States of America, 2021, 118(10):e0129338. [74] 高菲.利用piggyBac转座子及CRISPR文库规模化制备突变体鸡的研究[D].北京:中国农业大学, 2017. GAO F.Construction of mutant chickens via piggyBac transposon and CRISPR library[D].Beijing:China Agricultural University, 2017.(in Chinese) [75] 徐娟, 刘忠媛, 刘彦峰, 等.基于CRISPR-Cas9技术的鸡成纤维细胞系全基因组敲除文库的建立与初步应用[J].中国动物传染病学报, 2022, 45:1-10. XU J, LIU Z Y, LIU Y F, et al.Establishment and preliminary application of chicken fibroblast cell line based on genome-scale CRISPR-Cas9 knockout screening[J].Chinese Journal of Animal Infectious Diseases, 2022, 45:1-10.(in Chinese) [76] XU K, ZHANG X, LIU Z, et al.A transgene-free method for rapid and efficient generation of precisely edited pigs without monoclonal selection[J]. Science China-Life Sciences, 2022, 38(2):1-12. [77] LINO C A, HARPER J C, CARNEY J P, et al.Delivering CRISPR:A review of the challenges and approaches[J].Drug Delivery, 2018, 25(1):1234-1257. |
[1] | WEI Mingbang, BIANBA Qiongda, XIAO Qingqing, DUAN Mengqi, CHAMBA Yangzom, SHANG Peng. Cloning,Bioinformatics and Expression Analysis of CDKN1B Gene in Tibetan Pigs [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(6): 2196-2206. |
[2] | ZHANG Fangwei, ZHANG Qi, LEI Liangliang, SUN Wusheng, ZHANG Di, ZHANG Yunpeng, ZHANG Jingbo, WANG Xiuquan, ZHANG Jing, ZHANG Shumin. Polymorphism of HBEGF Gene and Its Association with Reproductive Traits in Songliao Black Pigs [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(6): 2370-2379. |
[3] | WANG Haorui, YU Baojun, YANG Jiayi, WEI Rong, FU Xi, WANG Chuanchuan, ZHANG Di, LI Desheng, CAI Zhengyun, GU Yaling, ZHANG Juan. Bioinformatics Analysis and Tissue Expression of DERA Gene in Jingyuan Chickens [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(5): 1764-1773. |
[4] | PAN Pengcheng, LEI Zongquan, LI Xian, HU Xiangyun, QIN Qiantao, QIN Zhaoxian, GUAN Zhihui, CHEN Baojian, XIE Bingkun. Bioinformatics Analysis,Eukaryotic Expression Vector Construction and Tissue Expression of MYL2 Gene in Luchuan Pigs [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(5): 1796-1806. |
[5] | JIANG Shanyi, ZHOU Bijun, WEN Ming, WANG Kaigong. Prevention of Traditional Chinese Medicine with Probiotics on Eimeria tenella [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(5): 2092-2102. |
[6] | LIU Hongrun, ZHU Siran, FENG Lingli, ZHANG Kun, YAN Gang, WANG Yubin, ZHANG Shuai, JIANG Shan, XU Di, LAN Ganqiu, LIANG Jing. Cloning,Bioinformatics Analysis and Tissue Expression Localization of CDO1 Gene in Large White Pigs [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(4): 1352-1363. |
[7] | CHANG Yitong, ZHANG Wei, PENG Yinglin, CHEN Chen. Evolutionary Analysis,Target Gene Prediction and Tissue Expression Analysis of miR-192 [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(3): 882-892. |
[8] | LI Xinran, ZHANG Qingyan, ZHA Weiwei, ZHU Miao. Bioinformatics Analysis and Expression of Wnt Gene Family in Chickens [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(1): 15-25. |
[9] | YIN Yi, LYU Yanqiu, CHEN Xuan, CAO Lipeng, ZHANG Junzheng, JIN Yi. Effects of Capacitation on Sperm Quality and Regulation of Acrosin Inhibitor Levels by Ubiquitin in Pigs [J]. China Animal Husbandry and Veterinary Medicine, 2023, 50(1): 174-185. |
[10] | ZHANG Hao, LIU Yixuan, ZHU Huiyuan, ZHANG Pengwei, LEI Yanru, GAO Chaoqun, LI Donghua, KANG Xiangtao. Bioinformatics Analysis of Differential Genes of Skin Feather Follicles in Chickens [J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(9): 3273-3282. |
[11] | CHEN Chuanhe, LIU Jiali, ZHANG Lilan, ZHAO Ying, TAO Cong. Bioinformatics Analysis of Porcine SGK Family Genes and Their Expression in Porcine Adipose Tissues and Adipocytes [J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(9): 3310-3320. |
[12] | GAO Xiaomin, ZHOU Shujian, CHEN Chen, JIN Jing, HU Cai, ZHANG Chen, ZUO Qisheng, ZHANG Yani, CHEN Guohong, LI Bichun. Regulation of STAT1 and Histone Acetylation Modification on lncRNA-BMP4 Transcription in Chickens [J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(9): 3321-3332. |
[13] | GAO Yefan, SONG Hanan, WANG Yunan, WU Yue, NIU Ruili, ZONG Xianchun, GUAN Weijun. Study on the Isolation, Culture and Differentiation Potential of Limbal Stem Cells from Beijing You Chickens [J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(9): 3372-3381. |
[14] | YANG Man, LIU Hai, ZHANG Run, HU Ziping, NIU Naiqi, WANG Lixian, ZHANG Longchao. Association Analysis of Polymorphism of MYH3 and MYH13 Genes with Meat Quality Traits in Beijing Black Pigs [J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(9): 3428-3437. |
[15] | YU Peng, NIU Xiaoyu, DONG Ling, LU Mengqi, CHEN Yanhong, LI Fan, SONG Hui. Research Progress on the Role of lncRNA in Porcine Abortion-related Virus Infection [J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(9): 3559-3568. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||