[1] SHARMA S,CHATTERJEE S,DATTA S,et al.Bacteriophages and its applications:An overview[J].Folia Microbiologica,2017,62(1):17-55. [2] DRULIS-KAWA Z,MAJKOWSKA-SKROBEK G,MACIEJEWSKA B,et al.Learning from bacteriophages-advantages and limitations of phage and phage-encoded protein applications[J]. Current Protein & Peptide Science,2012,13(8):699-722. [3] WEINBAUER M G.Ecology of prokaryotic viruses[J].FEMS Microbiology Reviews,2004,28(2):127-181. [4] GAO Z,FENG Y.Bacteriophage strategies for overcoming host antiviral immunity[J].Frontiers in Microbiology,2023,14:1211793. [5] AKSYUK A A,ROSSMANN M G.Bacteriophage assembly[J].Viruses,2011,3(3):172-203. [6] DRULIS-KAWA Z,MAJKOWSKA-SKROBEK G,MACIEJEWSKA B.Bacteriophages and phage-derived proteins-application approaches[J].Current Medicinal Chemistry,2015,22(14):1757-1773. [7] NORDBERG H,CANTOR M,DUSHEYKO S,et al.The genome portal of the department of energy joint genome institute:2014 updates[J].Nucleic Acids Research,2014,42(Database issue):D26-D31. [8] GLI AZŹNIEWICZ M,MIŁEK D,OLSZEWSKA P,et al.Advances in bacteriophage-mediated strategies for combating polymicrobial biofilms[J].Frontiers in Microbiology,2023,14:1320345. [9] BISEN M,KHARGA K,MEHTA S,et al.Bacteriophages in nature:Recent advances in research tools and diverse environmental and biotechnological applications[J].Environmental Science and Pollution Research International,2024,31(15):22199-22242. [10] 周 彪,甄向凯,欧阳松应.噬菌体裂解酶应用研究进展[J].微生物学通报,2021,48(9):3330-3340. ZHOU B,ZHEN X K,OUYANG S Y.Research progress in the application of bacteriophage lysin[J].Microbiology China,2021,48(9):3330-3340.(in Chinese) [11] ZHENG T,ZHANG C.Engineering strategies and challenges of endolysin as an antibacterial agent against Gram-negative bacteria[J].Microbial Biotechnology,2024,17(4):e14465. [12] LOESSNER M J.Bacteriophage endolysins--Current state of research and applications[J].Current Opinion in Microbiology,2005,8(4):480-487. [13] ABDELRAHMAN F,EASWARAN M,DARAMOLA O I,et al.Phage-encoded endolysins[J].Antibiotics (Basel,Switzerland),2021,10(2):124. [14] LIU H,HU Z,LI M,et al.Therapeutic potential of bacteriophage endolysins for infections caused by Gram-positive bacteria[J].Journal of Biomedical Science,2023,30(1):29. [15] MCGOWAN S,BUCKLE A M,MITCHELL M S,et al.X-ray crystal structure of the streptococcal specific phage lysin PlyC[J].Proceedings of the National Academy of Sciences of the United States of America,2012,109(31):12752-12757. [16] SUZUKI T,YANO K,SUGIMOTO S,et al.Endo-beta-N-acetylglucosaminidase,an enzyme involved in processing of free oligosaccharides in the cytosol[J].Proceedings of the National Academy of Sciences of the United States of America,2002,99(15):9691-9696. [17] STOJKOVI AĆ E A,ROTHMAN-DENES L B.Coliphage N4 N-acetylmuramidase defines a new family of murein hydrolases[J].Journal of Molecular Biology,2007,366(2):406-419. [18] SHIN J H,SULPIZIO A G,KELLEY A,et al.Structural basis of peptidoglycan endopeptidase regulation[J].Proceedings of the National Academy of Sciences of the United States of America,2020,117(21):11692-11702. [19] LÓPEZ-ARVIZU A,ROCHA-MENDOZA D,FARRÉS A,et al.Improved antimicrobial spectrum of the N-acetylmuramoyl-L-alanine amidase from Latilactobacillus sakei upon LysM domain deletion[J].World Journal of Microbiology & Biotechnology,2021,37(11):196. [20] PRITCHARD D G,DONG S,KIRK M C,et al.LambdaSa1 and LambdaSa2 prophage lysins of Streptococcus agalactiae[J].Applied and Environmental Microbiology,2007,73(22):7150-7154. [21] GARCÍA E,GARCÍA J L,GARCÍA P,et al.Molecular evolution of lytic enzymes of Streptococcus pneumoniae and its bacteriophages[J].Proceedings of the National Academy of Sciences of the United States of America,1988,85(3):914-918. [22] CHOI Y J,KIM S,KIM J.Development of a magnetic bead-based method for specific detection of Enterococcus faecalis using C-terminal domain of ECP3 phage endolysin[J].Journal of Microbiology and Biotechnology,2023,33(7):964-972. [23] LIM J,MYUNG H,LIM D,et al.Antimicrobial peptide thanatin fused endolysin PA90 (Tha-PA90) for the control of Acinetobacter baumannii infection in mouse model[J]. Journal of Biomedical Science,2024,31(1):36. [24] WANG I N,SMITH D L,YOUNG R.Holins:The protein clocks of bacteriophage infections[J].Annual Review of Microbiology,2000,54:799-825. [25] ZHOU B,WU Y,SU Z.Computational simulation of holin S105 in membrane bilayer and its dimerization through a helix-turn-helix motif[J].The Journal of Membrane Biology,2021,254(4):397-407. [26] XIANG Y,WANG S,HUANG H,et al.A novel holin from an Enterococcus faecalis phage and application in vitro and in vivo[J].Microbial Pathogenesis,2024,186:106471. [27] CAHILL J,YOUNG R.Phage lysis:Multiple genes for multiple barriers[J].Advances in Virus Research,2019,103:33-70. [28] SAMIR S.Molecular machinery of the triad holin,endolysin,and spanin:Key players orchestrating bacteriophage-induced cell lysis and their therapeutic applications[J].Protein and Peptide Letters,2024,31(2):85-96. [29] LUO X,WANG S,FENG Y,et al.Effect of ivermectin on the expression of P-glycoprotein in third-stage larvae of Haemonchus contortus isolated from China[J].Animals,2023,13(11):1841. [30] KONGARI R,RAJAURE M,CAHILL J,et al.Phage spanins:Diversity,topological dynamics and gene convergence[J].BMC Bioinformatics,2018,19(1):326. [31] YAMASHITA W,OJIMA S,TAMURA A,et al.Harnessing a T1 phage-derived spanin for developing phage-based antimicrobial development[J].Biodesign Research,2024,6:0028. [32] LATKA A,MACIEJEWSKA B,MAJKOWSKA-SKROBEK G,et al.Bacteriophage-encoded virion-associated enzymes to overcome the carbohydrate barriers during the infection process[J].Applied Microbiology and Biotechnology,2017,101(8):3103-3119. [33] RODRÍGUEZ-RUBIO L,MARTÍNEZ B,DONOVAN D M,et al.Bacteriophage virion-associated peptidoglycan hydrolases:Potential new enzybiotics[J].Critical Reviews in Microbiology,2013,39(4):427-434. [34] DA SILVA J D,MELO L D R,SANTOS S B,et al.Genomic and proteomic characterization of vB_SauM-UFV_DC4,a novel Staphylococcus jumbo phage[J].Applied Microbiology and Biotechnology,2023,107(23):7231-7250. [35] 张应春,杨子晨,谭银玲.噬菌体编码的抑菌蛋白[J].生命的化学,2020,40(1):86-94. ZHANG Y C,YANG Z C,TAN Y L.Bacteriophage-encoded bacteriostatic proteins[J].Chemistry of Life,2020,40(1):86-94.(in Chinese) [36] RAGUNATHAN P T,NG KWAN LIM E,MA X,et al.Mechanisms of regulation of cryptic prophage-encoded gene products in Escherichia coli[J].Journal of Bacteriology,2023,205(8):e0012923. [37] ZHANG P,ZHAO X,WANG Y,et al.Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins[J].Proceedings of the National Academy of Sciences of the United States of America,2022,119(9):e2116278119. [38] PONS B J,VAN HOUTE S,WESTRA E R,et al.Ecology and evolution of phages encoding anti-CRISPR proteins[J].Journal of Molecular Biology,2023,435(7):167974. [39] WU Z,ZHANG Y,XU X,et al.The holin-endolysin lysis system of the OP2-like phage X2 infecting Xanthomonas oryzae pv. oryzae[J].Viruses,2021,13(10):1949. [40] LEE C,KIM H,RYU S.Bacteriophage and endolysin engineering for biocontrol of food pathogens/pathogens in the food:Recent advances and future trends[J].Critical Reviews in Food Science and Nutrition,2023,63(27):8919-8938. [41] YOUNG R.Bacteriophage lysis:Mechanism and regulation[J].Microbiological Reviews,1992,56(3):430-481. [42] 陈 妞,余成敏,崔百明,等.解淀粉欧文氏菌噬菌体Kuerle的分离、基因组测定及其裂解功能分析[J].中国农业科学,2024,57(2):295-305. CHEN N,YU C M,CUI B M,et,al.Isolation,genome determination and lysis function analysis of phage kuerle of Erwinia amylovora[J].Scientia Agricultura Sinica,2024,57(2):295-305.(in Chinese) [43] LU H,LI Z,ELBAZ A,et al.Synergistic action of phages and lytic proteins with antibiotics:A combination strategy to target bacteria and biofilms[J].BMC Microbiology,2023,23(1):149. [44] OLIVEIRA H,SÃO-JOSÉ C,AZEREDO J.Phage-derived peptidoglycan degrading enzymes:Challenges and future prospects for in vivo therapy[J].Viruses,2018,10(6):292. [45] THÖNEBÖHN S,FISCHER D,KREILING V,et al.Identifying the components of the Shewanella phage LambdaSo lysis system[J].Journal of Bacteriology,2024,206(6):e0002224. [46] MTIMKA S,PILLAY P,KWEZI L,et al.An exploratory review of the potential of lytic proteins and bacteriophages for the treatment of tuberculosis[J]. Microorganisms,2024,12(3):570. [47] LOESSNER M J,SCHNEIDER A,SCHERER S.Modified Listeria bacteriophage lysin genes (ply) allow efficient overexpression and one-step purification of biochemically active fusion proteins[J].Applied and Environmental Microbiology,1996,62(8):3057-3060. [48] CASEWELL M,FRIIS C,MARCO E,et al.The European ban on growth-promoting antibiotics and emerging consequences for human and animal health[J].The Journal of Antimicrobial Chemotherapy,2003,52(2):159-161. [49] FERRIOL-GONZÁLEZ C,DOMINGO-CALAP P.Phage therapy in livestock and companion animals[J].Antibiotics (Basel,Switzerland),2021,10(5):559. [50] ÁLVAREZ A,FERNÁNDEZ L,GUTIÉRREZ D,et al.Methicillin-resistant Staphylococcus aureus in hospitals:Latest trends and treatments based on bacteriophages[J].Journal of Clinical Microbiology,2019,57(12):e01006-01019. [51] HADDAD KASHANI H,SCHMELCHER M,SABZALIPOOR H,et al.Recombinant endolysins as potential therapeutics against antibiotic-resistant Staphylococcus aureus:Current status of research and novel delivery strategies[J].Clinical Microbiology Reviews,2018,31(1):e00071-17. [52] TOTTÉ J E E,VAN DOORN M B,PASMANS S.Successful treatment of chronic Staphylococcus aureus-related dermatoses with the topical endolysin Staphefekt SA.100:A report of 3 cases[J].Case Reports in Dermatology,2017,9(2):19-25. [53] TAMAI E,YOSHIDA H,SEKIYA H,et al.X-ray structure of a novel endolysin encoded by episomal phage phiSM101 of Clostridium perfringens[J].Molecular Microbiology,2014,92(2):326-337. [54] RAJESH T,ANTHONY T,SARANYA S,et al.Functional characterization of a new holin-like antibacterial protein coding gene tmp1 from goat skin surface metagenome[J].Applied Microbiology and Biotechnology,2011,89(4):1061-1073. [55] MIYAKE K,ABE K,FERRI S,et al.A green-light inducible lytic system for cyanobacterial cells[J].Biotechnology for Biofuels,2014,7:56. [56] SHI Y,LI N,YAN Y,et al.Combined antibacterial activity of phage lytic proteins holin and lysin from Streptococcus suis bacteriophage SMP[J].Current Microbiology,2012,65(1):28-34. |