China Animal Husbandry and Veterinary Medicine ›› 2022, Vol. 49 ›› Issue (11): 4129-4138.doi: 10.16431/j.cnki.1671-7236.2022.11.003
• Biotechnology • Previous Articles Next Articles
XU Xin1, LIU Mingjun2
Received:
2022-05-10
Online:
2022-11-05
Published:
2022-11-04
CLC Number:
XU Xin, LIU Mingjun. Research Progress on Application of CRISPR/Cas9 Genome Editing Systems in Sheep[J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(11): 4129-4138.
[1] KIM J S.Genome editing comes of age[J]. Nature Protocols, 2016, 11(9):1573-1578. [2] BAK R O, GOMEZ-OSPINA N, PORTEUS M H.Gene editing on center stage[J]. Trends in Genetics, 2018, 34(8):600-611. [3] URNOV F D.Genome editing B.C.(before CRISPR):Lasting lessons from the "Old Testament"[J]. CRISPR Journal, 2018, 1(1):34-46. [4] HSU P, LANDER E, ZHANG F.Development and applications of CRISPR-Cas9 for genome engineering[J]. Cell, 2014, 157(6):1262-1278. [5] KOMOR A, BADRAN A, LIU D.CRISPR-based technologies for the manipulation of eukaryotic genomes[J]. Cell, 2017, 168:20-36. [6] KNOTT G, DOUDNA J.CRISPR-Cas guides the future of genetic engineering[J]. Science, 2018, 361(6405):866-869. [7] DE LOS ANGELES A, PHO N, REDMOND JR D E.Generating human organs via interspecies chimera formation:Advances and barriers[J]. The Yale Journal of Biology and Medicine, 2018, 91(3):333-342. [8] FEHILLY C B, WILLADSEN S M, TUCKER E M.Interspecific chimaerism between sheep and goat[J]. Nature, 1984, 307(5952):634-636. [9] HORVATH P, BARRANGOU R.CRISPR/Cas, the immune system of bacteria and archaea[J]. Science, 2010, 327(5962):167-170. [10] INEK M, CHYLINSKI K, FONFARA I, et al.A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity[J]. Science, 2012, 337(6096):816-821. [11] NIU Y, JIN M, LI Y, et al.Biallelic β-carotene oxygenase 2 knockout results in yellow fat in sheep via CRISPR/Cas9[J]. Animal Genetics, 2017, 48(2):242-244. [12] CRISPO M, MULET A P, TESSON L, et al.Efficient generation of myostatin knock-out sheep using CRISPR/Cas9 technology and microinjection into zygotes[J]. PLoS One, 2015, 10(8):e0136690. [13] NI W, QIAO J, HU S, et al.Efficient gene knockout in goats using CRISPR/Cas9 system[J]. PLoS One, 2014, 9(9):e106718. [14] WANG X, YU H, LEI A, et al.Generation of gene-modified goats targeting MSTN and FGF5 via zygote injection of CRISPR/Cas9 system[J]. Scientific Reports, 2015, 5:13878. [15] GAO Y, WU H, WANG Y, et al.Single Cas9 nickase induced generation of NRAMP1 knockin cattle with reduced off-target effects[J]. Genome Biology, 2017, 18(1):13. [16] HAI T, TENG F, GUO R, et al.One-step generation of knockout pigs by zygote injection of CRISPR/Cas system[J]. Cell Research, 2014, 24(3):372-375. [17] WHITWORTH K M, LEE K, BENNE J A, et al.Use of the CRISPR/Cas9 system to produce genetically engineered pigs from in vitro-derived oocytes and embryos[J]. Biology of Reproduction, 2014, 91(3):78. [18] WANG Y, DU Y, SHEN B, et al.Efficient generation of gene-modified pigs via injection of zygote with Cas9/sgRNA[J]. Scientific Reports, 2015, 5:8256. [19] WILLIAMS D K, PINZON C, HUGGINS S, et al.Genetic engineering a large animal model of human hypophosphatasia in sheep[J]. Scientific Reports, 2018, 8(1):16945. [20] EATON S L, PROUDFOOT C, LILLICO S G, et al.CRISPR/Cas9 mediated generation of an ovine model for infantile neuronal ceroid lipofuscinosis (CLN1 disease)[J]. Scientific Reports, 2019, 9(1):9891. [21] NIU Y, ZHAO X, ZHOU J, et al.Efficient generation of goats with defined point mutation (I397V) in GDF9 through CRISPR/Cas9[J]. Reproduction, Fertility and Development, 2018, 30(2):307-312. [22] WANG K, TANG X, LIU Y, et al.Efficient generation of orthologous point mutations in pigs via CRISPR-assisted ssODN-mediated homology-directed repair[J]. Molecular Therapy Nucleic Acids, 2016, 5(11):e396. [23] KOMOR A, KIM Y, PACKER M, et al.Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage[J]. Nature, 2016, 533(7603):420-424. [24] GAUDELLI N, KOMOR A, REES H, et al.Programmable base editing of A·T to G·C in genomic DNA without DNA cleavage[J]. Nature, 2017, 551(7681):464-471. [25] ZHOU S, CAI B, HE C, et al.Programmable base editing of the sheep genome revealed no genome-wide off-target mutations[J]. Frontiers in Genetics, 2019, 10:215. [26] LI G, ZHOU S, LI C, et al.Base pair editing in goat:Nonsense codon introgression into FGF5 results in longer hair[J]. FEBS Journal, 2019, 286(23):4675-4692. [27] XIE J, GE W, LI N, et al.Efficient base editing for multiple genes and loci in pigs using base editors[J]. Nature Communications, 2019, 10(1):2852. [28] ANZALONE A V, RANDOLPH P B, DAVIS J R, et al.Search-and-replace genome editing without double-strand breaks or donor DNA[J]. Nature, 576(7785):149-157. [29] CHEN P J, HUSSMANN J A, YAN J, et al.Enhanced prime editing systems by manipulating cellular determinants of editing outcomes[J]. Cell, 2021, 184(22):5635-5652. [30] ZETSCHE B, GOOTENBERG J S, ABUDAYYEH O O, et al.Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR/Cas system[J]. Cell, 2015, 163(3):759-771. [31] RAN F A, CONG L, YAN W X, et al.In vivo genome editing using Staphylococcus aureus Cas9[J]. Nature, 2015, 520(7546):186-191. [32] SUNG Y H, KIM J M, KIM H T, et al.Highly efficient gene knockout in mice and zebrafish with RNA-guided endonucleases[J]. Genome Research, 2014, 24(1):125-131. [33] VILARINO M, SUCHY F P, RASHID S T, et al.Mosaicism diminishes the value of pre-implantation embryo biopsies for detecting CRISPR/Cas9 induced mutations in sheep[J]. Transgenic Research, 2018, 27(6):525-537. [34] YEN S T, ZHANG M, DENG J M, et al.Somatic mosaicism and allele complexity induced by CRISPR/Cas9 RNA injections in mouse zygotes[J]. Developmental Biology, 2014, 393(1):3-9. [35] YANG L, GUELL M, BYRNE S, et al.Optimization of scarless human stem cell genome editing[J]. Nucleic acids Research, 2013, 41(19):9049-9061. [36] RICHARDSON C D, RAY G J, DEWITT M A, et al.Enhancing homology-directed genome editing by catalytically active and inactive CRISPR-Cas9 using asymmetric donor DNA[J]. Nature Biotechnology, 2016, 34(3):339-344. [37] CHEN F, PRUETT-MILLER S M, HUANG Y, et al.High-frequency genome editing using ssDNA oligonucleotides with zinc-finger nucleases[J]. Nature Methods, 2011, 8(9):753-755. [38] PEROTA A, LAGUTINA I, DUCHI R, et al.Generation of cattle knockout for galactose-alpha1, 3-galactose and N-glycolylneuraminic acid antigens[J]. Xenotransplantation, 2019, 26(5):e12524. [39] MENCHACA A, BARRERA N, NETO P, et al.Advances and limitations of in vitro embryo production in sheep and goats[J]. Animal Reproduction, 2016, 13(133):273-278. [40] MENCHACA A, ANEGON I, WHITELAW C, et al.New insights and current tools for genetically engineered (GE) sheep and goats[J]. Theriogenology, 2016, 86(1):160-169. [41] LI W R, LIU C X, ZHANG X M, et al.CRISPR/Cas9-mediated loss of FGF5 function increases wool staple length in sheep[J]. FEBS Journal, 2017, 284(17):2764-2773. [42] ZHANG X, LI W, LIU C, et al.Alteration of sheep coat color pattern by disruption of ASIP gene via CRISPR Cas9[J]. Scientific Reports, 2017, 7(1):8149. [43] REMY S, CHENOUARD V, TESSON L, et al.Generation of gene-edited rats by delivery of CRISPR/Cas9 protein and donor DNA into intact zygotes using electroporation[J]. Scientific Reports, 2017, 7(1):16554. [44] QIN W, DION S L, KUTNY P M, et al.Efficient CRISPR/Cas9-mediated genome editing in mice by zygote electroporation of nuclease[J]. Genetics, 2015, 200(2):423-430. [45] MENCHACA A, SANTOS P, CUADRO F, et al.From reproductive technologies to genome editing in small ruminants:An embryo's journey[J]. Animal Reproduction, 2018, 15(Suppl 1):984-995. [46] TANIHARA F, HIRATA M, NGUYEN N T, et al.Generation of PDX-1 mutant porcine blastocysts by introducing CRISPR/Cas9-system into porcine zygotes via electroporation[J]. Animal Science Journal, 2018, 90(1):55-61. [47] TANIHARA F, HIRATA M, NGUYEN N T, et al.Generation of a TP53-modified porcine cancer model by CRISPR/Cas9-mediated gene modification in porcine zygotes via electroporation[J]. PLoS One, 2018, 13(10):e0206360. [48] HIRATA M, TANIHARA F, WITTAYARAT M, et al.Genome mutation after introduction of the gene editing by electroporation of Cas9 protein (GEEP) system in matured oocytes and putative zygotes[J]. In Vitro Cellular and Developmental Biology-Animal, 2019, 55(4):237-242. [49] MIAO D, GIASSETTI M I, CICCARELLI M, et al.Simplified pipelines for genetic engineering of mammalian embryos by CRISPR-Cas9 electroporationdagger[J]. Biology of Reproduction, 2019, 101(1):177-187. [50] SLINGENBERGH J I, GILBERT M, DE BALOGH K I, et al.Ecological sources of zoonotic diseases[J]. Revue Scientifique et Technique-office International Des Epizooties, 2004, 23(2):467-484. [51] WHITWORTH K M, ROWLAND R R, EWEN C L, et al.Gene-edited pigs are protected from Porcine reproductive and respiratory syndrome virus[J]. Nature Biotechnology, 2016, 34(1):20-22. [52] HAN H, YONGHE M A, WANG T, et al.One-step generation of myostatin gene knockout sheep via the CRISPR/Cas9 system[J]. Frontiers of Agricultural Science and Engineering, 2014, 1(1):2-5. [53] HU R, FAN Z Y, WANG B Y, et al.RAPID COMMUNICATION:Generation of FGF5 knockout sheep via the CRISPR/Cas9 system[J]. Journal of Animal Science, 2017, 95(5):2019-2024. [54] FAN Z, PERISSE I V, COTTON C U, et al.A sheep model of cystic fibrosis generated by CRISPR/Cas9 disruption of the CFTR gene[J]. JCI Insight, 2018, 3(19):e123529. [55] JIANG H, WONG W H.SeqMap:Mapping massive amount of oligonucleotides to the genome[J]. Bioinformatics, 2008, 24(20):2395-2396. [56] SANGSU B, JEONGBIN P, JIN-SOO K.Cas-OFFinder:A fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases[J]. Bioinformatics, 2014, 10:1473-1475. [57] SHENGSONG X, BIN S, CHAOBAO Z, et al.sgRNAcas9:A software package for designing CRISPR sgRNA and evaluating potential off-target cleavage sites[J]. PLoS One, 2014, 9(6):e100448. [58] XIAOLONG W, JING L, YIYUAN N, et al.Low incidence of SNVs and indels in trio genomes of Cas9-mediated multiplex edited sheep[J]. BMC Genomics, 2018, 19(1):397. [59] LI C, ZHOU S, LI Y, et al.Trio-based deep sequencing reveals a low incidence of off-target mutations in the offspring of genetically edited goats[J]. Frontiers in Genetics, 2018, 9:449. [60] FABRE S, PIERRE A, MULSANT P, et al.Regulation of ovulation rate in mammals:Contribution of sheep genetic models[J]. Reproductive Biology and Endocrinology, 2006, 4:20. [61] ZHANG X, LI W, WU Y, et al.Disruption of the sheep BMPR-ⅠB gene by CRISPR/Cas9 in in vitro-produced embryos[J]. Theriogenology, 2017, 91:163-172. [62] ZHOU S, YU H, ZHAO X, et al.Generation of gene-edited sheep with a defined Booroola fecundity gene (FecBB) mutation in bone morphogenetic protein receptor type 1B (BMPR1B) via clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated (Cas) 9[J]. Reproduction, Fertility and Development, 2018, 30(12):1616-1621. [63] ZHOU S, DING Y, LIU J, et al.Highly efficient generation of sheep with a defined FecB(B) mutation via adenine base editing[J]. Genetics Selection Evolution, 2020, 52(1):35. [64] XU X, ZHANG X, PENG X, et al.Comparison of the efficiency and precision of base editor and CRISPR/Cas9 for inducing defined point mutation (S395F) in ovine embryos[J]. Reproduction in Domestic Animals, 2022, 57(8):829-838. [65] ABDOLI R, ZAMANI P, MIRHOSEINI S Z, et al.A review on prolificacy genes in sheep[J]. Reproduction in Domestic Animals, 2016, 51(5):631-637. [66] WANG X, NIU Y, ZHOU J, et al.Multiplex gene editing via CRISPR/Cas9 exhibits desirable muscle hypertrophy without detectable off-target effects in sheep[J]. Scientific Reports, 2016, 6:32271. [67] ZHOU S, KALDS P, LUO Q, et al.Optimized Cas9:sgRNA delivery efficiently generates biallelic MSTN knockout sheep without affecting meat quality[J]. BMC Genomics, 2022, 23(1):348. [68] ZHAO Y, CHEN M, LI Y, et al.A 90-day safety study of meat from MSTN and FGF5 double-knockout sheep in Wistar rats[J]. Life (Basel), 2022, 12(2):204. [69] WU M, WEI C, LIAN Z, et al.Rosa 26-targeted sheep gene knock-in via CRISPR-Cas9 system[J]. Scientific Reports, 2016, 6:24360. [70] TENG M, TAO J, YANG M, et al.An AANAT/ASMT transgenic animal model constructed with CRISPR/Cas9 system serving as the mammary gland bioreactor to produce melatonin-enriched milk in sheep[J]. Journal of Pineal Research, 2017, 63(1):e12046. [71] MENCHACA A, MULET A P, DOS SANTOS NETO P C, et al.CRISPR in sheep:A southern perspective[Abstract].In:Abstracts from the UC davis transgenic animal research conference Ⅺ.[J]. Transgenic Research, 2018, 27(5):467-487. [72] YOCKEY L J, JURADO K A, ARORA N, et al.Type Ⅰ interferons instigate fetal demise after Zika virus infection[J]. Science Immunology, 2018, 3(19):eaao1680. [73] FAN Z, REGOUSKI M, YANG M, et al.Program and abstracts of the 14th transgenic technology meeting (TT2017):Snowbird Resort, Salt Lake City, Utah, USA, 1-4 October 2017[J]. Transgenic Research, 2017, 26(Suppl 1):1-45. [74] RASHID T, KOBAYASHI T, NAKAUCHI H.Revisiting the flight of Icarus:Making human organs from PSCs with large animal chimeras[J]. Cell Stem Cell, 2014, 15(4):406-409. [75] VILARINO M, RASHID S T, SUCHY F P, et al.CRISPR/Cas9 microinjection in oocytes disables pancreas development in sheep[J]. Scientific Reports, 2017, 7(1):17472. |
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