›› 2013, Vol. ›› Issue (5): 1-7.

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Establishment and Preliminary Application of a Real-time Fluorescent Quantitative RT-PCR Assay for Detection of Type Ⅰ Interferon Effect Factor of HeLa Cells

LIU Ji-yu1,2, DU Yi-jun2,3, LIU Xing2, WU Jia-qiang2,3, LI Jun2,3, CONG Xiao-yan2,3, ZHAO Xin-hua2,3, XU Shao-jian2,3, SUN Wen-bo2,3, SHI Jian-li2,3, SHAN Hu1, WANG Jin-bao1,2,3   

  1. 1. Shandong Key Laboratory of Preventive Veterinary Medicine, Qingdao Agricultural University, Qingdao 266109, China;
    2. Shandong Key Laboratory of Animal Disease Control and Breeding, Jinan 250100, China;
    3. Institute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Jinan 250100, China
  • Received:2012-10-22 Online:2013-05-20 Published:2013-05-27

Abstract: The assay was aimed to establish a SYBR Green Ⅰ fluorescent quantitative RT-PCR method to detect the mRNA of type Ⅰ interferon effect factor ISG15, ISG56, Mx1, OAS and PKR in HeLa cells. Using this method, foot and mouth disease virus (FMDV) L protein inhibiting the type Ⅰ IFN signaling pathway was evaluated. Total RNA was extracted by TRIzol reagent and Oligo d(T)15 was used for reverse transcription, the target gene was amplified individually by PCR and cloned into pMD18-T vector, the positive recombinant plasmid was constructed and used as template for SYBR Green Ⅰ fluorescence quantitative RT-PCR. The standard curve and melting curve were established and the sensitivity, specificity and reproducibility assay were conducted. Using this established method, the inhibiting effect on type Ⅰ IFN effect factor of FMDV L protein was detected. The ISG15, ISG56, Mx1, OAS the PKR relative mRNA level of HeLa cells transfected with eukaryotic expression plasmid expressing FMDV L protein were obviously reduced compare to HeLa cells transfected with empty vector or eukaryotic expression plasmid expressing GST. The SYBR Green Ⅰ fluorescent quantitative RT-PCR method was established, which laid the foundation to evaluate the mRNA levels of type Ⅰ IFN effect factor in HeLa cells.This method was successfully applied to FMDV L protein inhibition of type Ⅰ IFN signaling pathway.

Key words: Real-time fluorescent quantitative RT-PCR; SYBR GreenⅠ; foot and mouth disease virus; L protein; interferon

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