›› 2010, Vol. 37 ›› Issue (7): 93-98.

• 遗传繁育 • 上一篇    下一篇

牛趋化因子受体基因1第2外显子的单核苷酸多态性分析

周雷1,2,王洪梅2,王长法2,李秋玲2,侯明海2,仲跻峰2,柳楠1   

  1. (1.青岛农业大学,青岛 266109;2.山东省农业科学院奶牛研究中心,济南 250100)
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2010-07-20 发布日期:2010-07-20
  • 通讯作者: 柳楠;仲跻峰

Single Nucleotide Polymorphisms within the Second Conspicuous Factor of CXCR1 Gene in Bos taurus

ZHOU Lei1,2,WANG Hong-mei2,WANG Chang-fa2,LI Qiu-ling2,
HOU Ming-hai2,ZHONG Ji-feng2,LIU Nan1
  

  1. (1.Qingdao Agricultural University,Qingdao 266109,China;2. Dairy Cattle Research Center,Shandong Academy of Agricultural Science,Jinan 250100,China)
  • Received:1900-01-01 Revised:1900-01-01 Online:2010-07-20 Published:2010-07-20
  • Contact: LIU Nan;ZHONG Ji-feng

摘要: 采用DNA测序、巢氏PCR和CRS-PCR方法对中国荷斯坦牛、鲁西黄牛、渤海黑牛的趋化因子受体基因1(CXCR1)的单核苷酸多态性(SNPs)进行研究,在第2外显子上发现了4个SNPs,分别为291 bp(C/T)、333 bp(C/T)、337 bp(A/G)和365 bp(C/T),这4个位点在中国荷斯坦牛、鲁西黄牛、渤海黑牛群体中均达到中度多态(0.25<PIC<0.5),优势等位基因分别为C、C、A、C,等位基因频率分别为0.82/0.67/0.65、0.80/0.74/0.71、0.70/0.65/0.82、0.56/0.58/0.56。经χ2适合性检验,渤海黑牛所有位点全部达到Hardy-Weinberg平衡状态;荷斯坦牛在突变位点291 bp(C/T)、333 bp(C/T)和337 bp(A/G)达到Hardy-Weinberg平衡状态;鲁西黄牛仅在365 bp(C/T)位点达到Hardy-Weinberg平衡状态。

关键词: 牛; CXCR1基因; 单核苷酸多态性; 优势等位基因

Abstract: The single nucleotide polymorphisms (SNPs) within the chemokine receptor CXCR1 gene in Holstein cattle,Luxi Yellow cattle and Bohai Black cattle were investigated by DNA sequencing technology,nested-PCR and CRS-PCR methods.Sequencing results showed that four SNPs in exon 2 were identified,which they were 291 bp (C/T),333 bp (C/T),337 bp (A/G) and 365 bp (C/T).The value of polymorphism information content indicated(0.25<PIC<0.5) that all the four SNPs were moderate polymorphism in Holstein cattle,Luxi Yellow cattle and Bohai Black cattle.Fur
thermore,C, C, A and C predominan allele were identical at 291 bp (C/T),333 bp (C/T),337 bp (A/G) and 365 bp (C/T),with the allelic frequencies 0.82/0.67/0.65,0.80/0.74/0.71,0.70/0.65/0.82,0.56/0.58/0.56 respectivly. Chi-square test indicated all the sites of Bohai Black cattle were in accordance with the Hardy-Weinberg equilibrium,while Holstein cattle meet Hardy-Weinberg equilibrium (P>0.05) at 291 bp (C/T),333 bp (C/T) and 337 bp (A/G),and the Luxi Yellow cattle meet Hardy-Weinberg equilibrium only at 365 bp (C/T).

Key words: Bos taurus; CXCR1 gene; single nucleotide polymorphisms (SNPs); predominan allele

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