[1] DELATTE B,WANG F,NGOC L V,et al.RNA biochemistry.Transcriptome-wide distribution and function of RNA hydroxymethylcytosine[J].Science,2016,351(6270):282-285. [2] XU Y,QI X,HU M,et al.Transcriptome analysis of adipose tissue indicates that the cAMP signaling pathway affects the feed efficiency of pigs[J].Genes,2018,9(7):336. [3] DAVIE K,JANSSENS J,KOLDERE D,et al.A single-cell transcriptome atlas of the aging drosophila brain[J].Cell,2018,174(4):982-998. [4] DO NASCIMENTO N C,GUIMARAES A M S,DOS SANTOS A P,et al.RNA-Seq based transcriptome of whole blood from immunocompetent pigs (Sus scrofa) experimentally infected with Mycoplasma suis strain Illinois[J].Veterinary Research,2018,49(1):225. [5] MIAO Z,WEI P,KHAN M A,et al.Transcriptome analysis reveals differential gene expression in intramuscular adipose tissues of Jinhua and Landrace pigs[J].Journal of Veterinary Medical Science,2018,80(6):953-959. [6] FU Y,LI J,TANG Q,et al.Integrated analysis of methylome,transcriptome and miRNAome of three pig breeds[J].Epigenomics,2018,10(5):597-612. [7] XU X,MISHRA B,QIN N,et al.Differential transcriptome analysis of early postnatal developing longissimus dorsi muscle from two pig breeds characterized in divergent myofiber traits and fatness[J].Animal Biotechnology,2018,15(3):1-12. [8] ZHANG S,BAO J,GONG X,et al.Hazards of bisphenol A-blocks RNA splicing leading to abnormal testicular development in offspring male mice[J].Chemosphere,2019,230:432-439. [9] LIU W,FENG X,CHEN Z,et al.Transient silencing of an expansin HvEXPA1 inhibits root cell elongation and reduces Al accumulation in root cell wall of Tibetan wild barley[J].Environmental and Experimental Botany,2019,165:120-128. [10] SHARMA D,GOLLA N,SINGH S,et al.An efficient method for extracting next-generation sequencing quality RNA from liver tissue of recalcitrant animal species[J].Journal of Cellular Physiology,2019,234(9):14405-14412. [11] ZHANG K,FAN W,HUANG Z,et al.Transcriptome analysis identifies novel responses and potential regulatory genes involved in 12-deoxyphorbol-13-phenylacetate biosynthesis of Euphorbia resinifera[J].Industrial Crops and Products,2019,135:138-145. [12] LV J,ZHAO F,FENG J,et al.Transcriptomic analysis reveals the mechanism on the response of Chlorococcum sp.GD to glucose concentration in mixotrophic cultivation[J].Bioresource Technology,2019,288(121568):1322. [13] DONG H,XU B,JI K.Comparative transcriptome analysis of genes involved in response to thermal stress and leaf colour change of Acer palmatum[J].Scientia Horticulturae,2019,255:77-85. [14] RYU S,OH S,PARK M R,et al.Pathogenesis of enterohemorrhagic Escherichia coli O157:H7 is mediated by the cytochrome P450 family in Caenorhabditis elegans animal model[J].Food Control,2019,103:182-185. [15] LI F,LI H,ZHANG L,et al.X chromosome-linked long noncoding RNA lnc-XLEC1 regulates c-Myc-dependent cell growth by collaborating with MBP-1 in endometrial cancer[J].International Journal of Cancer,2019,145(4):927-940. [16] JIANG J,MESSNER S,KELM J M,et al.Human 3D multicellular microtissues:An upgraded model for the in vitro mechanistic investigation of inflammation-associated drug toxicity[J].Toxicology Letters,2019,312:34-44. [17] VELCULESCU V E,ZHANG L,ZHOU W,et al.Characterization of the yeast transcriptome[J].Cell,1997,88(2):243-251. [18] SHIRAISHI K,NAKAJIMA T,SHICHINO S,et al.In vitro expansion of endogenous human alveolar epithelial type Ⅱ cells in fibroblast-free spheroid culture[J].Biochemical and Biophysical Research Communications,2019,515(4):579-585. [19] KING T,VOCKLER C J,ALLNUTT T R,et al.Transcriptomic response of Escherichia coli O157 isolates on meat:Comparison between a typical Australian isolate from cattle and a pathogenic clinical isolate[J].Food Microbiology,2019,82:378-387. [20] MIRHASHEMI M E,NOUBARY F,CHAPMAN-BONOFIGLIO S,et al.Transcriptome analysis of pig intestinal cell monolayers infected with Cryptosporidium parvum asexual stages[J].Parasites & Vectors,2018,11(1):176. [21] LONG K,MAO K,CHE T,et al.Transcriptome differences in frontal cortex between wild boar and domesticated pig[J].Animal Science Journal,2018,89(6):848-857. [22] KALETSKY R,LAKHINA V,AREY R,et al.The C.elegans adult neuronal IIS/FOXO transcriptome reveals adult phenotype regulators[J].Nature,2016,529(7584):92-96. [23] KARAISKOS N,WAHLE P,ALLES J,et al.The Drosophila embryo at single-cell transcriptome resolution[J].Science,2017,358(6360):194-199. [24] HARTMANN A,FISCHER D,KINZEL L,et al.Assessment of the structural and functional diversities of plant microbiota:Achievements and challenges-A review[J].Journal of Advanced Research,2019,19(20):3-13. [25] IKEDA J,SHIBA N,TSUJIMOTO S,et al.Whole transcriptome sequencing reveals a KMT2A-USP2 fusion in infant acute myeloid leukemia[J].Genes Chromosomes & Cancer,2019,58(9):669-672. [26] TANG D,DENG D,ZHANG S,et al.Similarity analysis of the immune-related genes from Chinese sturgeon (Acipenser sinensis) and dabry's sturgeon (Acipenser dabryanus)[J].Turkish Journal of Fisheries and Aquatic Sciences,2019,19(10):865-871. [27] PENG X,WANG Y,HU H,et al.Identification of the molecular subgroups in coronary artery disease by gene expression profiles[J].Journal of Cellular Physiology,2019,234(9):16540-16548. [28] AO D,XIA P,JIANG S,et al.Comparative transcriptome analysis of TLR8 signaling cells revealed the porcine TLR8 specific differentially expressed genes[J].Developmental and Comparative Immunology,2019,98(25):129-136. [29] TRAVISANY D,AYALA-RASO A,DI GENOVA A,et al.RNA-Seq analysis and transcriptome assembly of raspberry fruit (Rubus idaeus "Heritage") revealed several candidate genes involved in fruit development and ripening[J].Scientia Horticulturae,2019,254:26-34. [30] MO H,WANG L,MA S,et al.Transcriptome profiling of Gossypium arboreum during fiber initiation and the genome-wide identification of trihelix transcription factors[J].Gene,2019,709:36-47. [31] MELE M,FERREIRA P G,REVERTER F,et al.The human transcriptome across tissues and individuals[J].Science,2015,348(6235):660-665. [32] SHANG P,WANG Z,CHAMBA Y,et al.A comparison of prenatal muscle transcriptome and proteome profiles between pigs with divergent growth phenotypes.[J].Journal of Cellular Biochemistry,2018,225(23):335-336. [33] XU Q,QU C,WAN J,et al.Effect of dietary chitosan oligosaccharide supplementation on the pig ovary transcriptome[J].RSC Advances,2018,8(24):13266-13273. [34] MORGAN M,MUCH C,DIGIACOMO M,et al.mRNA 3'uridylation and poly (A) tail length sculpt the mammalian maternal transcriptome[J].Nature,2017,548(7667):347-351. [35] SIRRI R,VITALI M,ZAMBONELLI P,et al.Effect of diets supplemented with linseed alone or combined with vitamin E and selenium or with plant extracts,on Longissimus thoracis transcriptome in growing-finishing Italian Large White pigs[J].Journal of Animal Science and Biotechnology,2018,9(1):226-227. [36] HE X,XIE S,XIE P,et al.Genome-wide identification of stress-associated proteins (SAP) with A20/AN1 zinc finger domains associated with abiotic stresses responses in Brassica napus[J].Environmental and Experimental Botany,2019,165(56):108-119. [37] GAO H,LI F,XU Z,et al.Genome-wide analysis of methyl jasmonate-regulated isoform expression in the medicinal plant Andrographis paniculata[J].Industrial Crops and Products,2019,135:39-48. [38] NASRABADI P N,ZAREIAN S,NAYERI Z,et al.A detailed image of rutin underlying intracellular signaling pathways in human SW480 colorectal cancer cells based on miRNAs-lncRNAs-mRNAs-TFs interactions[J].Journal of Cellular Physiology,2019,234(9):15570-15580. [39] TAN S,WANG W,TIAN C,et al.Post-transcriptional regulation through alternative splicing after infection with Flavobacterium columnare in channel catfish (Ictalurus punctatus)[J].Fish & Shellfish Immunology,2019,91:188-193. [40] SHEN L,GAN M,ZHANG S,et al.Transcriptome analyses reveal adult metabolic syndrome with intrauterine growth restriction in pig models[J].Frontiers in Genetics,2018,9(12):22-30. [41] WOJCIECHOWICZ B,KOLAKOWSKA J,ZGLEJC-WASZAK K,et al.The whole blood transcriptome at the time of maternal recognition of pregnancy in pigs reflects certain alterations in gene expression within the endometrium and the myometrium.[J].Theriogenology,2018,126:159-165. [42] AYALA-CUELLAR A P,KIM C,HWANG K,et al.Characterization of canine adipose tissue-derived mesenchymal stem cells immortalized by SV40-T retrovirus for therapeutic use[J].Journal of Cellular Physiology,2019,234(9):16630-16642. |